STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0277PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: acr:Acry_1166 triple helix repeat-containing collagen. (714 aa)    
Predicted Functional Partners:
Xcel_0875
KEGG: rfr:Rfer_0173 hypothetical protein.
  
     0.672
Xcel_1410
KEGG: mxa:MXAN_5528 hypothetical protein.
  
     0.574
Xcel_1142
TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein.
  
     0.530
Xcel_0275
KEGG: scl:sce7370 hypothetical protein.
       0.473
Xcel_0276
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_6475 ABC transporter, ATP-binding protein.
       0.473
Xcel_0140
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swd:Swoo_1852 hypothetical protein.
  
     0.470
Xcel_0278
PFAM: protein of unknown function DUF81; KEGG: reh:H16_A3656 predicted permease.
       0.446
Xcel_0327
Hypothetical protein.
  
     0.435
Xcel_0148
TIGRFAM: conserved repeat domain protein; KEGG: bcr:BCAH187_A3696 conserved repeat domain protein.
  
     0.420
Xcel_1439
KEGG: scl:sce9075 hypothetical protein.
  
   
 0.417
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.