STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0301PFAM: NUDIX hydrolase; Phosphoglycerate mutase; KEGG: rec:RHECIAT_PC0000074 putative NTP pyrophosphohydrolase protein; Belongs to the Nudix hydrolase family. (324 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.896
Xcel_0298
KEGG: hypothetical protein.
 
     0.647
Xcel_0303
PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: pde:Pden_5003 cupin 2, conserved barrel domain protein.
       0.596
Xcel_0102
PFAM: Excalibur domain protein; KEGG: xau:Xaut_0293 translation initiation factor IF-2.
  
     0.478
Xcel_0682
KEGG: rce:RC1_0787 hypothetical protein.
  
     0.462
Xcel_0304
PFAM: Endoribonuclease L-PSP; KEGG: scl:sce2000 translation initiation inhibitor.
       0.451
Xcel_1882
PFAM: protein of unknown function DUF344; KEGG: aba:Acid345_0575 polyphosphate:AMP phosphotransferase.
 
 
   0.416
mshD
Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
 
     0.400
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.