STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0307PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: scl:sce8661 oxidoreductase. (790 aa)    
Predicted Functional Partners:
Xcel_0309
Transcriptional regulator, PaaX family; PFAM: PaaX domain protein domain; PaaX domain protein; KEGG: bha:BH0194 repressor in the phenylacetic acid catabolic pathway.
 
     0.929
Xcel_0304
PFAM: Endoribonuclease L-PSP; KEGG: scl:sce2000 translation initiation inhibitor.
 
  
 0.903
Xcel_1893
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 
 0.875
Xcel_0306
PFAM: acyl-CoA thioesterase; KEGG: tesB; acyl-CoA thioesterase II; K10805 acyl- CoA thioesterase II.
 
   
 0.847
Xcel_0305
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: dac:Daci_5633 5-oxopent-3-ene-1,2,5- tricarboxylate decarboxylase.
  
  
 0.822
Xcel_0308
Thioesterase-like protein; KEGG: sal:Sala_0686 4-hydroxybenzoyl-CoA thioesterase.
  
  
 0.815
Xcel_0303
PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: pde:Pden_5003 cupin 2, conserved barrel domain protein.
 
     0.755
Xcel_2617
PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: dal:Dalk_3943 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.753
Xcel_3297
PFAM: Endoribonuclease L-PSP; KEGG: mlo:mll4506 hypothetical protein.
 
  
 0.717
Xcel_0315
KEGG: pol:Bpro_4735 putative indolepyruvate oxidoreductase subunit B.
 
   
 0.709
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.