STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0310PFAM: Luciferase-like monooxygenase; KEGG: azo:azo1944 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Xcel_1978
PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
 
 0.962
Xcel_1772
PFAM: NADPH-dependent FMN reductase; KEGG: bmj:BMULJ_05427 FMN reductase.
 
 0.954
Xcel_0431
PFAM: Luciferase-like monooxygenase; KEGG: rle:pRL100402 putative sulfonate monooxygenase.
  
  
 
0.929
Xcel_0311
PFAM: flavin reductase domain protein FMN-binding; KEGG: sil:SPO1806 flavin reductase domain- containing protein.
 
  
 0.758
Xcel_3097
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein; KEGG: bph:Bphy_3188 xenobiotic compound monooxygenase A subunit.
  
     0.754
Xcel_0315
KEGG: pol:Bpro_4735 putative indolepyruvate oxidoreductase subunit B.
 
     0.751
Xcel_0314
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: pol:Bpro_4734 thiamine pyrophosphate enzyme- like TPP-binding.
 
     0.699
Xcel_0312
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azo:azo1936 AraC family transcriptional regulator.
 
     0.636
Xcel_0425
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1761 ABC transporter, substrate-binding protein, aliphatic sulphonates.
 
    0.612
Xcel_0313
PFAM: cyclase family protein; KEGG: plu:plu1439 hypothetical protein.
 
     0.568
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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