Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Xcel_0331PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ccs:CCNA_03057 glyoxalase family protein. (129 aa)    
Predicted Functional Partners:
Xcel_0332
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rec:RHECIAT_CH0000435 rRNA methylase protein.
       0.648
Xcel_1116
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL3033 hypothetical protein.
  
     0.610
Xcel_0330
PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: sfu:Sfum_1698 DEAD/DEAH box helicase domain protein.
       0.552
Xcel_2691
KEGG: pde:Pden_0844 glycosyl transferase, family 2.
  
     0.444
Xcel_1642
PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_4522 hypothetical protein.
  
     0.431
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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