STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0380PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1439 lipoprotein releasing system, ATP-binding protein. (243 aa)    
Predicted Functional Partners:
Xcel_0932
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rec:RHECIAT_PA0000259 putative ABC transporter, ATP-binding protein.
 
    
0.894
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
 
    0.867
Xcel_3156
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
   0.865
Xcel_0379
PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator.
 
     0.840
Xcel_1906
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0255 ABC transporter related.
 
    
0.792
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
      0.777
Xcel_1615
PFAM: protein of unknown function DUF214; KEGG: dar:Daro_1168 hypothetical protein.
   0.659
Xcel_0100
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_C1161 polar amino acid ABC transporter inner membrane protein.
 
 
    0.641
Xcel_0816
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter related.
   0.625
Xcel_2604
PFAM: protein of unknown function DUF214; KEGG: eba:ebA6805 hypothetical protein.
  
 
 0.622
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.