STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0382KEGG: hypothetical protein. (245 aa)    
Predicted Functional Partners:
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
 
     0.674
Xcel_0747
KEGG: aba:Acid345_2329 alpha-1,6-glucosidases, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
   
    0.661
Xcel_0221
Hypothetical protein; KEGG: afw:Anae109_0175 integral membrane protein- like protein.
  
     0.654
Xcel_0379
PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator.
       0.620
Xcel_0380
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_1439 lipoprotein releasing system, ATP-binding protein.
       0.620
Xcel_2823
PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_1773 hypothetical protein.
  
     0.538
Xcel_2233
TIGRFAM: DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein; KEGG: mpt:Mpe_B0011 ATP-dependent DNA ligase.
  
    0.523
Xcel_2219
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
    0.499
Xcel_1605
Hypothetical protein.
   
    0.473
Xcel_2419
PFAM: aminoglycoside phosphotransferase; KEGG: bpt:Bpet2370 hypothetical protein.
   
    0.473
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.