STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0419PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator. (333 aa)    
Predicted Functional Partners:
Xcel_0421
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: scl:sce3306 ribose/xylose/arabinose/galactoside ABC-type transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 0.998
Xcel_0422
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rpi:Rpic_4098 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.998
Xcel_0420
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_4809 ABC transporter related.
 0.987
Xcel_2400
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bvi:Bcep1808_1507 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
Xcel_0882
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.960
Xcel_2970
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mxa:MXAN_4778 sensory box histidine kinase PhoR1.
 
  
 
 0.927
Xcel_0406
PFAM: inner-membrane translocator; KEGG: bha:BH3440 L-arabinose ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
    0.925
Xcel_0883
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1214 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
    0.904
Xcel_2486
KEGG: lch:Lcho_2475 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein.
 
    
 0.903
Xcel_2472
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: acr:Acry_2317 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.900
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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