STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0422Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rpi:Rpic_4098 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (329 aa)    
Predicted Functional Partners:
Xcel_0419
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator.
 0.998
Xcel_0420
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_4809 ABC transporter related.
 0.997
Xcel_0421
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: scl:sce3306 ribose/xylose/arabinose/galactoside ABC-type transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.983
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.879
Xcel_2401
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_5039 ABC transporter related.
 
 0.849
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
 0.794
Xcel_0405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0839 ABC transporter related.
 
 0.779
Xcel_2399
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: mlo:mll1012 periplasmic ribose-binding protein.
 
 
 0.770
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
 
 0.769
Xcel_0257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
 0.739
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.