STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0425TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1761 ABC transporter, substrate-binding protein, aliphatic sulphonates. (348 aa)    
Predicted Functional Partners:
Xcel_0423
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100399 putative permease component of ABC transporter.
 
 0.998
ssuB
ABC transporter related protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.997
Xcel_0435
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce0166 ABC transporter permease protein.
 
 0.995
Xcel_0434
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce0167 ABC transporter ATP-binding protein.
 
 0.992
Xcel_0431
PFAM: Luciferase-like monooxygenase; KEGG: rle:pRL100402 putative sulfonate monooxygenase.
 
  0.989
Xcel_1978
PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein.
 
 
  0.960
Xcel_1772
PFAM: NADPH-dependent FMN reductase; KEGG: bmj:BMULJ_05427 FMN reductase.
 
 
  0.941
Xcel_0436
KEGG: mlo:mll9181 hypothetical protein.
  
  
 
0.926
Xcel_0713
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0826 ABC transporter, ATPase subunit.
  
 0.859
Xcel_0712
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afw:Anae109_0428 binding-protein-dependent transport systems inner membrane component.
 
  
 0.835
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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