STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0432PFAM: aldo/keto reductase; KEGG: rle:RL2983 putative aldo/keto reductase. (343 aa)    
Predicted Functional Partners:
Xcel_0435
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce0166 ABC transporter permease protein.
       0.777
Xcel_0436
KEGG: mlo:mll9181 hypothetical protein.
       0.777
Xcel_0433
Monooxygenase; KEGG: scl:sce0168 monooxygenase.
       0.773
Xcel_0434
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce0167 ABC transporter ATP-binding protein.
       0.773
Xcel_0431
PFAM: Luciferase-like monooxygenase; KEGG: rle:pRL100402 putative sulfonate monooxygenase.
       0.768
Xcel_3214
PFAM: aldo/keto reductase; KEGG: met:M446_1420 2,5-didehydrogluconate reductase.
 
 
 0.470
Xcel_2618
PFAM: aldo/keto reductase; KEGG: mrd:Mrad2831_5462 aldo/keto reductase.
 
 
0.442
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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