STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0520Hypothetical protein; KEGG: cak:Caul_2110 filamentous haemagglutinin outer membrane protein. (389 aa)    
Predicted Functional Partners:
Xcel_0522
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: dno:DNO_0755 phage tail tape measure family protein.
  
  
 0.941
Xcel_0519
PFAM: Tail Collar domain protein; KEGG: mrd:Mrad2831_5676 tail collar domain- containing protein.
  
    0.836
Xcel_0518
Hypothetical protein.
       0.773
Xcel_0521
Hypothetical protein.
       0.773
Xcel_1949
TIGRFAM: phage tail protein; PFAM: NHL repeat containing protein; KEGG: rsq:Rsph17025_4353 hypothetical protein.
  
  
 0.761
Xcel_1954
KEGG: mlo:mlr6558 hypothetical protein.
  
  
 0.743
Xcel_1951
PFAM: GPW/gp25 family protein; KEGG: rsq:Rsph17025_4351 hypothetical protein.
  
  
 0.736
Xcel_1958
PFAM: tail sheath protein; KEGG: rsq:Rsph17025_4344 hypothetical protein.
  
  
 0.730
Xcel_1960
PFAM: tail sheath protein; KEGG: rsq:Rsph17025_4342 hypothetical protein.
  
  
 0.730
Xcel_0517
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pde:Pden_0267 peptidoglycan-binding domain 1 protein.
       0.579
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.