STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0530TolA protein; KEGG: ccs:CCNA_03339 TolA protein. (62 aa)    
Predicted Functional Partners:
Xcel_0529
Hypothetical protein.
       0.773
Xcel_0531
Hypothetical protein.
       0.572
Xcel_0532
TIGRFAM: phage protein, HK97 gp10 family; PFAM: TP901-1 ORF40 family protein; KEGG: nar:Saro_2728 phage protein, HK97, GP10.
       0.572
Xcel_0533
Hypothetical protein.
       0.572
Xcel_0534
Hypothetical protein.
       0.572
Xcel_0528
Hypothetical protein.
       0.531
Xcel_0527
Hypothetical protein.
       0.444
Xcel_0535
Hypothetical protein; KEGG: rsq:Rsph17025_2821 peptidase U35, phage prohead HK97.
       0.415
Xcel_0536
KEGG: nha:Nham_3336 hypothetical protein.
       0.406
Xcel_0537
Hypothetical protein; KEGG: mxa:MXAN_1429 response regulator receiver domain/DnaJ domain protein.
       0.406
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.