STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0551Hypothetical protein. (205 aa)    
Predicted Functional Partners:
Xcel_0547
Hypothetical protein.
       0.773
Xcel_0548
Hypothetical protein.
       0.773
Xcel_0549
Hypothetical protein.
       0.773
Xcel_0550
Hypothetical protein.
       0.773
Xcel_0552
KEGG: bmc:BAbS19_I04860 SMC family protein.
       0.773
Xcel_0553
Hypothetical protein.
       0.773
Xcel_0554
Hypothetical protein.
       0.773
Xcel_0555
Hypothetical protein.
       0.773
Xcel_0556
Hypothetical protein.
       0.773
Xcel_0557
Hypothetical protein.
       0.773
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.