STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0608PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family. (281 aa)    
Predicted Functional Partners:
Xcel_0609
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1597 ABC transporter, ATP-binding protein.
  
 0.967
Xcel_3319
PFAM: ABC-2 type transporter; KEGG: sus:Acid_6966 ABC-2 type transporter.
  
  
  0.722
Xcel_0607
PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A1687 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ.
 
  
 0.671
Xcel_3320
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_6967 ABC transporter related.
  
 0.653
Xcel_3136
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit.
  
 0.571
Xcel_0417
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbp:Sbal223_2832 ABC transporter related.
  
 0.546
Xcel_1355
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_1815 ABC transporter, ATP-binding protein, putative.
  
 0.542
Xcel_1352
KEGG: ade:Adeh_3915 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.528
Xcel_0057
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.519
Xcel_0606
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: smt:Smal_2340 two component transcriptional regulator, LuxR family.
       0.482
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.