STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0609PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mxa:MXAN_1597 ABC transporter, ATP-binding protein. (301 aa)    
Predicted Functional Partners:
Xcel_0608
PFAM: ABC-2 type transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family.
  
 0.967
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
     
0.845
Xcel_3319
PFAM: ABC-2 type transporter; KEGG: sus:Acid_6966 ABC-2 type transporter.
 
    0.671
Xcel_1351
PFAM: ABC-2 type transporter; KEGG: rsq:Rsph17025_3253 ABC transporter related.
  
 0.624
Xcel_3137
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
 
    0.591
Xcel_0607
PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A1687 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ.
 
    0.582
Xcel_3132
PFAM: ABC-2 type transporter; KEGG: bcz:BCZK3149 ABC transporter efflux permease; daunorubicin resistance transmembrane protein.
  
 0.514
Xcel_0606
Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: smt:Smal_2340 two component transcriptional regulator, LuxR family.
      0.482
Xcel_0418
PFAM: ABC-2 type transporter; KEGG: bcb:BCB4264_A2507 putative ABC transporter, permease protein.
  
 0.466
Xcel_3074
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A3688 ABC transporter component.
 
   
0.466
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.