STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0659KEGG: sil:SPO1241 hypothetical protein. (138 aa)    
Predicted Functional Partners:
Xcel_1426
Hypothetical protein.
  
     0.586
Xcel_3121
Hypothetical protein.
  
     0.561
Xcel_2227
PFAM: metallophosphoesterase; KEGG: serine/threonine-protein kinase C.
  
     0.560
Xcel_2364
Hypothetical protein.
  
     0.539
Xcel_0660
KEGG: sml:Smlt1384 hypothetical protein.
       0.528
Xcel_3360
PFAM: major facilitator superfamily MFS_1; KEGG: gsu:GSU0752 transporter, putative.
  
     0.523
Xcel_1915
Hypothetical protein.
  
     0.460
Xcel_1897
KEGG: ade:Adeh_3281 hypothetical protein.
  
     0.454
Xcel_0014
PFAM: protein of unknown function DUF881; KEGG: bha:BH2562 hypothetical protein.
  
     0.442
Xcel_1923
Hypothetical protein.
  
     0.442
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.