STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0699PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214. (934 aa)    
Predicted Functional Partners:
Xcel_0701
PFAM: transcriptional regulator PadR family protein; KEGG: abo:ABO_1780 hypothetical protein.
 
     0.952
Xcel_0700
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3708 ABC transporter-related protein.
 
    0.946
Xcel_2435
KEGG: gdi:GDI0760 hypothetical protein.
  
     0.693
Xcel_0381
Hypothetical protein; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein.
  
     0.645
Xcel_0697
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bsu:BSU08220 hypothetical protein.
 
     0.564
Xcel_0698
PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: mrd:Mrad2831_5367 lipid ABC transporter ATPase/inner membrane protein.
 
     0.555
Xcel_2548
KEGG: sus:Acid_6302 glycosyl transferase family protein.
  
     0.554
Xcel_3284
KEGG: rlt:Rleg2_1526 hypothetical protein.
  
     0.554
Xcel_1188
PFAM: extracellular solute-binding protein family 1; KEGG: hypothetical protein.
  
     0.529
Xcel_0702
KEGG: mxa:MXAN_7409 hypothetical protein.
       0.527
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.