STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0703KEGG: rsq:Rsph17025_3141 hypothetical protein. (233 aa)    
Predicted Functional Partners:
Xcel_0704
PFAM: OmpA/MotB domain protein; KEGG: oan:Oant_0490 OmpA/MotB domain protein.
       0.628
Xcel_0702
KEGG: mxa:MXAN_7409 hypothetical protein.
       0.578
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
       0.539
Xcel_0699
PFAM: protein of unknown function DUF214; KEGG: acp:A2cp1_1921 protein of unknown function DUF214.
       0.407
Xcel_0700
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3708 ABC transporter-related protein.
       0.407
Xcel_0701
PFAM: transcriptional regulator PadR family protein; KEGG: abo:ABO_1780 hypothetical protein.
       0.407
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.