STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0713PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0826 ABC transporter, ATPase subunit. (265 aa)    
Predicted Functional Partners:
Xcel_0712
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afw:Anae109_0428 binding-protein-dependent transport systems inner membrane component.
  
 0.977
Xcel_0714
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: aba:Acid345_0825 ABC transporter, substrate- binding protein, aliphatic sulphonates.
 
  
 0.975
Xcel_0423
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100399 putative permease component of ABC transporter.
  
 0.939
Xcel_0435
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce0166 ABC transporter permease protein.
  
 0.919
Xcel_2809
NifC-like ABC-type porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
    
 0.911
Xcel_0425
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bur:Bcep18194_B1761 ABC transporter, substrate-binding protein, aliphatic sulphonates.
  
 0.859
Xcel_0761
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein.
 
     
0.846
Xcel_2711
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU09890 hypothetical protein.
 
     
0.783
Xcel_0717
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.757
Xcel_0716
TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: noc:Noc_2289 sulfate adenylyltransferase subunit 2.
  
  
 0.749
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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