STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0714TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: aba:Acid345_0825 ABC transporter, substrate- binding protein, aliphatic sulphonates. (357 aa)    
Predicted Functional Partners:
Xcel_0712
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afw:Anae109_0428 binding-protein-dependent transport systems inner membrane component.
  
 0.983
Xcel_0713
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aba:Acid345_0826 ABC transporter, ATPase subunit.
 
  
 0.975
Xcel_0718
Sulfite reductase (ferredoxin); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: aba:Acid345_2373 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like.
 
   
 0.806
Xcel_0717
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.802
Xcel_0716
TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: noc:Noc_2289 sulfate adenylyltransferase subunit 2.
  
  
 0.768
Xcel_0715
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.761
Xcel_0423
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100399 putative permease component of ABC transporter.
 
  
 0.733
Xcel_0435
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce0166 ABC transporter permease protein.
 
  
 0.689
Xcel_0719
PFAM: conserved hypothetical protein; KEGG: afw:Anae109_3197 hypothetical protein.
       0.678
Xcel_0720
Hypothetical protein.
       0.678
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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