STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0730PFAM: protein of unknown function DUF1684; KEGG: smt:Smal_2753 protein of unknown function DUF1684. (267 aa)    
Predicted Functional Partners:
Xcel_0731
PFAM: protein of unknown function DUF1684; KEGG: ank:AnaeK_0098 protein of unknown function DUF1684.
 
    
0.833
Xcel_0733
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpi:Rpic_0791 binding-protein-dependent transport systems inner membrane component.
       0.774
Xcel_0732
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
       0.773
Xcel_0729
PFAM: NLPA lipoprotein; KEGG: bid:Bind_2455 NlpA lipoprotein.
  
    0.667
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.