STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0736KEGG: bch:Bcen2424_6766 PE-PGRS family protein. (405 aa)    
Predicted Functional Partners:
Xcel_2503
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
  
    0.751
Xcel_3007
KEGG: fibrocystin-L-like protein.
  
     0.745
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
       0.714
Xcel_2407
Hypothetical protein; KEGG: ank:AnaeK_0563 thermosensitive mutation transmembrane protein, SuhR.
  
     0.707
Xcel_2547
KEGG: hypothetical protein.
  
     0.699
Xcel_0779
PFAM: UvrD/REP helicase; KEGG: mpo:Mpop_4135 UvrD/REP helicase.
  
     0.681
Xcel_2424
KEGG: similar to hedgehog protein.
  
     0.668
Xcel_2816
PFAM: SAF domain protein; KEGG: bpy:Bphyt_1652 Flp pilus assembly protein CpaB.
  
     0.656
Xcel_1273
PFAM: protein of unknown function DUF58; KEGG: mmr:Mmar10_2677 hypothetical protein.
  
    0.649
Xcel_2425
KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family.
  
     0.641
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.