STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0739PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbr:BB0278 putative ferredoxin reductase. (510 aa)    
Predicted Functional Partners:
Xcel_1359
PFAM: Rieske [2Fe-2S] domain protein; KEGG: ppf:Pput_2879 Rieske (2Fe-2S) domain- containing protein.
  
 0.963
Xcel_3061
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cak:Caul_1879 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.928
Xcel_1814
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: mfa:Mfla_0318 nitrite reductase (NAD(P)H) large subunit, NirD.
 
 
 0.774
Xcel_1625
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: pcr:Pcryo_1318 nitrite reductase (NAD(P)H) large subunit, NirD.
 
 
 0.724
Xcel_1306
PFAM: Rieske [2Fe-2S] domain protein; KEGG: mxa:MXAN_7381 iron-sulfur cluster-binding protein, Rieske family.
  
 
 0.630
Xcel_1503
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin).
  
  
 0.594
Xcel_1824
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: bcy:Bcer98_3399 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.542
Xcel_0740
Hypothetical protein.
       0.531
Xcel_2405
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: apa:APP7_1068 alcohol dehydrogenase / acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.509
Xcel_1626
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rce:RC1_2177 siroheme synthase.
  
  
 0.444
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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