STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0749PFAM: GCN5-related N-acetyltransferase; KEGG: glo:Glov_0083 GCN5-related N- acetyltransferase. (179 aa)    
Predicted Functional Partners:
trmD
tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      0.829
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.606
Xcel_3140
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; KEGG: gme:Gmet_2818 putative PAS/PAC sensor protein.
  
     0.557
Xcel_2497
KEGG: Os02g0711100; hypothetical protein.
  
     0.528
Xcel_2227
PFAM: metallophosphoesterase; KEGG: serine/threonine-protein kinase C.
  
     0.514
Xcel_1164
UTP-GlnB uridylyltransferase, GlnD; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; DNA polymerase beta domain protein region; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: ade:Adeh_1692 metal dependent phosphohydrolase.
  
     0.470
Xcel_1312
Hypothetical protein; KEGG: met:M446_5885 adenylate/guanylate cyclase.
  
 
   0.453
Xcel_0807
PFAM: peptidase A24A prepilin type IV; KEGG: bcm:Bcenmc03_0546 prepilin peptidase.
 
     0.437
Xcel_3029
Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands.
 
     0.435
Xcel_0173
PFAM: protein of unknown function DUF742.
  
     0.424
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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