STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0752PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein. (283 aa)    
Predicted Functional Partners:
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
  
 
0.995
Xcel_0753
PFAM: inner-membrane translocator; KEGG: bbt:BBta_2139 putative L-arabinose transport system permease protein AraH.
  
 0.954
Xcel_0257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
  
  
 
0.903
Xcel_2473
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acr:Acry_2316 ABC transporter related.
      0.903
Xcel_0405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0839 ABC transporter related.
  
  
 
0.902
Xcel_1247
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_2987 ABC transporter related.
 
     
0.899
Xcel_0101
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL80063 putative ATP-binding component of ABC transporter.
 
     
0.898
Xcel_0145
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1003 ABC transporter ATP-binding protein.
 
     
0.898
Xcel_1128
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU03590 hypothetical protein.
 
     
0.892
Xcel_0106
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsh:Dshi_1981 ABC transporter related.
 
     
0.881
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.