STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0756PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: aba:Acid345_1451 3-demethylubiquinone-9 3- methyltransferase. (158 aa)    
Predicted Functional Partners:
Xcel_3003
PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:bll7168 hypothetical protein.
 
  
 0.712
Xcel_0757
TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: nma:NMA0348 putative nuclease.
       0.636
Xcel_1516
PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: dol:Dole_3066 hypothetical protein.
  
    0.604
Xcel_0902
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3912 bifunctional deaminase- reductase-like.
 
    0.554
Xcel_1687
Hypothetical protein; KEGG: LAMB1; laminin, beta 1; K05636 laminin, beta 1.
   
    0.552
Xcel_0288
PFAM: NAD-dependent epimerase/dehydratase; KEGG: gbe:GbCGDNIH1_1597 quinate/shikimate dehydrogenase.
   
    0.479
Xcel_2089
PFAM: NAD-dependent epimerase/dehydratase; KEGG: xcv:XCV0076 hypothetical protein.
   
    0.479
Xcel_0181
PFAM: bifunctional deaminase-reductase domain protein; KEGG: oan:Oant_1327 bifunctional deaminase- reductase domain protein.
 
    0.467
Xcel_1400
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_4011 bifunctional deaminase- reductase domain protein.
 
    0.467
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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