STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0770PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_0572 alpha/beta hydrolase fold. (268 aa)    
Predicted Functional Partners:
Xcel_0772
PFAM: multiple antibiotic resistance (MarC)-related protein; Integral membrane protein TerC; KEGG: sil:SPO2448 MarC membrane protein.
 
     0.602
Xcel_0769
PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: scl:sce8667 hypothetical protein.
   
 
 0.582
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.572
Xcel_0771
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: afw:Anae109_1278 phosphotransferase domain- containing protein.
       0.546
Xcel_2162
PFAM: extracellular solute-binding protein family 1; KEGG: pmy:Pmen_3132 maltose ABC transporter periplasmic protein.
  
     0.470
Xcel_0617
PFAM: Tetratricopeptide TPR_4; KEGG: scl:sce6745 hypothetical protein.
  
     0.409
Xcel_0903
PFAM: Domain of unknown function DUF1918.
  
     0.409
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.