STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0797Hypothetical protein. (199 aa)    
Predicted Functional Partners:
Xcel_0796
Hypothetical protein; KEGG: xau:Xaut_4973 helicase domain-containing protein.
 
     0.829
Xcel_0805
Type IV secretory pathway VirB4 protein-like protein; KEGG: rle:pRL70152 putative crown gall-like type IV secretion system protein.
 
     0.799
Xcel_0820
Hypothetical protein; KEGG: bch:Bcen2424_0449 TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.798
Xcel_0800
Type IV secretory pathway VirD4 protein-like protein; KEGG: atc:AGR_L_58 component of type IV secretion system.
 
     0.791
Xcel_1575
KEGG: bxe:Bxe_A1764 putative type IV secretory pathway protein VirD4.
 
     0.791
Xcel_2343
KEGG: bxe:Bxe_A1764 putative type IV secretory pathway protein VirD4.
 
     0.791
Xcel_0819
Hypothetical protein.
 
     0.790
Xcel_0798
Hypothetical protein.
       0.782
Xcel_0802
KEGG: baa:BXB0111 hypothetical protein.
 
     0.779
Xcel_0821
Hypothetical protein.
 
     0.776
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.