STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0823Hypothetical protein. (91 aa)    
Predicted Functional Partners:
Xcel_0824
PFAM: Peptidase M23; KEGG: ade:Adeh_1347 peptidase M23B.
       0.819
Xcel_0825
KEGG: hypothetical protein.
       0.806
Xcel_0826
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: nse:NSE_0001 ParB family chromosome partitioning protein.
       0.793
Xcel_0827
Hypothetical protein.
       0.793
Xcel_0829
PFAM: Bifunctional DNA primase/polymerase; KEGG: mno:Mnod_2621 bifunctional DNA primase/polymerase.
       0.788
Xcel_0828
Hypothetical protein; KEGG: GJ17745 gene product from transcript GJ17745- RA.
       0.762
Xcel_0822
PFAM: TM2 domain containing protein; KEGG: btr:Btr_0859 hypothetical protein.
       0.417
Xcel_0830
PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002649 putative NTP pyrophosphohydrolase protein, MutT/NUDIX family; Belongs to the Nudix hydrolase family.
       0.414
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.