STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0830PFAM: NUDIX hydrolase; KEGG: rec:RHECIAT_CH0002649 putative NTP pyrophosphohydrolase protein, MutT/NUDIX family; Belongs to the Nudix hydrolase family. (291 aa)    
Predicted Functional Partners:
Xcel_3078
PFAM: NUDIX hydrolase; KEGG: gme:Gmet_1790 NUDIX hydrolase.
  
     0.743
Xcel_0831
PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: rru:Rru_A3276 ornithine carbamoyltransferase.
 
     0.738
Xcel_0048
PFAM: NUDIX hydrolase; KEGG: bba:Bd2220 MutT/NUDIX family hydrolase/pyrophosphatase; Belongs to the Nudix hydrolase family.
  
     0.718
Xcel_0148
TIGRFAM: conserved repeat domain protein; KEGG: bcr:BCAH187_A3696 conserved repeat domain protein.
  
     0.563
Xcel_0147
KEGG: bat:BAS3452 hypothetical protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; conserved repeat domain protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
  
     0.514
Xcel_0832
Hypothetical protein.
       0.472
Xcel_0826
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: nse:NSE_0001 ParB family chromosome partitioning protein.
       0.419
Xcel_0827
Hypothetical protein.
       0.419
Xcel_0828
Hypothetical protein; KEGG: GJ17745 gene product from transcript GJ17745- RA.
       0.419
Xcel_0829
PFAM: Bifunctional DNA primase/polymerase; KEGG: mno:Mnod_2621 bifunctional DNA primase/polymerase.
       0.419
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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