STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0839Hypothetical protein. (61 aa)    
Predicted Functional Partners:
Xcel_0840
PFAM: type II secretion system protein; KEGG: mlo:mlr6486 hypothetical protein.
       0.701
Xcel_0843
Hypothetical protein.
       0.695
Xcel_0841
PFAM: type II secretion system protein; KEGG: bbr:BB2099 hypothetical protein.
       0.693
Xcel_0844
PFAM: SAF domain protein; KEGG: xop:PXO_01713 periplasmic protease.
       0.691
Xcel_0842
PFAM: type II secretion system protein E; KEGG: hne:HNE_1153 type II/IV secretion system protein.
       0.678
Xcel_0838
PFAM: TadE family protein.
       0.654
Xcel_0837
PFAM: TadE family protein; KEGG: cti:RALTA_B0191 conserved hypothetical protein; putative TadE-like.
       0.640
Xcel_0836
KEGG: ret:RHE_CH01044 hypothetical protein.
       0.628
Xcel_0845
Hypothetical protein.
       0.598
Xcel_0846
Hypothetical protein.
       0.592
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.