STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0882Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family. (363 aa)    
Predicted Functional Partners:
Xcel_0884
TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bxe:Bxe_B1038 ABC sugar transporter, periplasmic ligand binding protein.
 0.996
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.995
Xcel_0883
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1214 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.963
Xcel_0419
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator.
 
 0.960
Xcel_2401
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_5039 ABC transporter related.
 
 0.894
Xcel_0420
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpy:Bphyt_4809 ABC transporter related.
 
 0.871
Xcel_0752
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
 0.816
Xcel_0405
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_0839 ABC transporter related.
 
 0.784
Xcel_0750
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL100463 putative ATP-binding component of ABC transporter.
 
 0.780
Xcel_0257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein.
 
 0.761
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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