STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0893PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr3057 3-ketoacyl-(acyl-carrier-protein) reductase. (260 aa)    
Predicted Functional Partners:
Xcel_0894
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: ret:RHE_CH01730 putative oxidoreductase protein.
 
   
 0.937
Xcel_2138
Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.738
Xcel_2135
(Acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; KEGG: sml:Smlt1028 putative malonyl CoA-acyl carrier protein transacylase.
 
 0.605
Xcel_0426
PFAM: sulfatase; KEGG: pzu:PHZ_c0420 arylsulfatase.
   
 
 0.595
Xcel_2767
PFAM: PfkB domain protein; KEGG: gbm:Gbem_3234 1-phosphofructokinase.
  
  
 0.577
Xcel_3244
KEGG: ank:AnaeK_2924 hypothetical protein.
   
 
 0.575
fabH
3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
 
  
 0.548
Xcel_0890
TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: bcj:BCAL0851 putative iron-sulphur cluster containing protein.
   
   0.533
Xcel_0099
Hypothetical protein.
    
 0.531
Xcel_1417
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_6034 enoyl-(acyl carrier protein) reductase.
 
  
 0.516
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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