STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0903PFAM: Domain of unknown function DUF1918. (160 aa)    
Predicted Functional Partners:
Xcel_1445
PFAM: membrane-bound metal-dependent hydrolase; KEGG: gbe:GbCGDNIH1_1245 predicted membrane-bound metal-dependent hydrolase.
 
     0.684
Xcel_0111
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mll2156 hypothetical protein.
  
     0.681
Xcel_0487
PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: cti:RALTA_B0173 putative protease, transglutaminase motif.
  
     0.621
Xcel_0484
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ade:Adeh_3063 VCBS.
  
     0.572
Xcel_0427
PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: sse:Ssed_4139 putative outer membrane adhesin like proteiin.
  
     0.561
Xcel_0902
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_3912 bifunctional deaminase- reductase-like.
       0.543
Xcel_3024
Hypothetical protein.
  
     0.542
Xcel_0490
FHA domain containing protein; PFAM: Forkhead-associated protein; KEGG: Hypothetical protein CBG02561.
  
     0.538
Xcel_2368
KEGG: smt:Smal_1720 transport protein.
  
     0.505
Xcel_2738
KEGG: hypothetical protein.
  
     0.503
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.