STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_0985PFAM: Phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein. (180 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.824
Xcel_2550
KEGG: met:M446_5306 hypothetical protein.
 
     0.692
Xcel_1426
Hypothetical protein.
  
     0.688
Xcel_0986
PFAM: ribonuclease BN; KEGG: mpt:Mpe_A0042 BrkB-like serum-resistance protein.
       0.646
Xcel_1414
Hypothetical protein.
  
     0.625
Xcel_2501
PFAM: Prophage CP4-57 regulatory; KEGG: sbl:Sbal_4353 putative transcriptional regulator.
  
     0.620
Xcel_2502
Hypothetical protein.
  
     0.588
Xcel_0235
Hypothetical protein.
  
     0.574
disA
Protein of unknown function DUF147; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
  
     0.541
Xcel_2500
Hypothetical protein.
  
     0.534
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.