STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1010PFAM: NUDIX hydrolase; KEGG: bbt:BBta_0933 hypothetical protein. (181 aa)    
Predicted Functional Partners:
Xcel_1013
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      0.907
Xcel_1009
PFAM: PfkB domain protein; KEGG: hch:HCH_06560 ribokinase family sugar kinase.
       0.752
Xcel_3265
PFAM: conserved hypothetical protein; KEGG: psa:PST_3725 Mg2+ transport ATPase.
  
    0.626
Xcel_1011
PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC5071 macrolide-efflux protein.
       0.554
Xcel_3081
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: SNF2 superfamily protein.
  
     0.463
Xcel_1064
Hypothetical protein.
  
     0.427
Xcel_1286
PFAM: cell division protein FtsQ; Polypeptide- transport-associated domain protein FtsQ-type; KEGG: swi:Swit_3942 polypeptide-transport- associated domain-containing protein.
  
     0.401
Xcel_2947
PFAM: DSBA oxidoreductase.
  
    0.400
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.