STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1064Hypothetical protein. (189 aa)    
Predicted Functional Partners:
Xcel_1065
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: azo:azo3700 thioredoxin-disulfide reductase; Belongs to the thioredoxin family.
       0.615
Xcel_2681
PFAM: Septum formation initiator; KEGG: hypothetical protein LOC744254.
  
     0.463
Xcel_2547
KEGG: hypothetical protein.
  
     0.436
Xcel_1010
PFAM: NUDIX hydrolase; KEGG: bbt:BBta_0933 hypothetical protein.
  
     0.427
Xcel_1050
Hypothetical protein.
  
     0.411
Xcel_1066
PFAM: transcriptional coactivator/pterin dehydratase; KEGG: aba:Acid345_2331 pterin-4-alpha-carbinolamine dehydratase.
       0.410
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.