STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1077KEGG: xca:xccb100_1233 hypothetical protein. (503 aa)    
Predicted Functional Partners:
Xcel_2431
Hypothetical protein.
  
     0.577
Xcel_1349
PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N- acetyltransferase.
  
     0.535
Xcel_2146
Hypothetical protein.
  
     0.517
Xcel_3276
KEGG: mrd:Mrad2831_1188 hypothetical protein.
  
     0.504
Xcel_3123
KEGG: bbt:BBta_3059 hypothetical protein.
  
     0.491
Xcel_3175
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein.
  
     0.487
Xcel_1855
Hypothetical protein; KEGG: bbt:BBta_4512 phosphatidate cytidylyltransferase.
  
     0.457
Xcel_0838
PFAM: TadE family protein.
  
     0.445
Xcel_1076
PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; KEGG: mxa:MXAN_0278 mercuric reductase, truncated.
       0.442
Xcel_0148
TIGRFAM: conserved repeat domain protein; KEGG: bcr:BCAH187_A3696 conserved repeat domain protein.
  
     0.431
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.