STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1098PFAM: globin; KEGG: bha:BH2854 hypothetical protein. (127 aa)    
Predicted Functional Partners:
Xcel_1097
PFAM: acyl-CoA thioesterase; KEGG: ret:RHE_CH03975 acyl-CoA thioesterase II protein.
       0.798
Xcel_2414
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mlo:mll5046 putative FAD-binding dehydrogenase.
      0.694
Xcel_1096
KEGG: sml:Smlt0110 putative viral-like DNA topoisomerase.
       0.645
Xcel_1099
PFAM: phosphotransferase system PTS EIIB protein; KEGG: bmj:BMULJ_02774 PTS system N- acetylglucosamine-specific IIB component.
       0.553
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.