STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1107PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: hypothetical protein; K07443 methylated-DNA- protein-cysteine methyltransferase related protein. (140 aa)    
Predicted Functional Partners:
Xcel_1106
PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: hypothetical protein; Belongs to the FPG family.
       0.689
Xcel_1105
TIGRFAM: ribose 5-phosphate isomerase; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: sfu:Sfum_1376 sugar-phosphate isomerases, RpiB/LacA/LacB family.
       0.678
Xcel_1426
Hypothetical protein.
  
     0.592
Xcel_3284
KEGG: rlt:Rleg2_1526 hypothetical protein.
 
     0.529
Xcel_1104
Neprilysin; PFAM: peptidase M13; peptidase M13 neprilysin; KEGG: mxa:MXAN_3160 peptidase, M13 (neprilysin) family.
       0.489
Xcel_2028
Hypothetical protein.
  
     0.460
Xcel_0695
Conserved hypothetical protein; KEGG: cti:RALTA_A0294 putative transmembrane cytochrome oxidase complex biogenesis factor.
  
     0.456
Xcel_1497
Hypothetical protein; KEGG: GK24882 gene product from transcript GK24882- RA.
  
     0.455
Xcel_1415
Hypothetical protein.
  
     0.438
Xcel_1301
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: glo:Glov_0173 S4 domain protein YaaA.
     
 0.435
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.