STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1113Hypothetical protein. (174 aa)    
Predicted Functional Partners:
Xcel_1112
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: afw:Anae109_0322 alcohol dehydrogenase.
       0.703
Xcel_3011
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sus:Acid_5754 glyoxalase.
 
     0.508
Xcel_2052
PFAM: CsbD family protein; KEGG: hypothetical protein.
  
     0.483
Xcel_1349
PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3954 GCN5-related N- acetyltransferase.
  
    0.469
Xcel_0903
PFAM: Domain of unknown function DUF1918.
  
    0.466
Xcel_1326
Hypothetical protein.
  
     0.461
Xcel_1114
Hypothetical protein.
       0.434
Xcel_1965
PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_2479 GCN5-related N- acetyltransferase.
  
    0.401
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.