STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1137PFAM: Amylo-alpha-16-glucosidase; KEGG: bha:BH3691 hypothetical protein. (682 aa)    
Predicted Functional Partners:
Xcel_1138
PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3690 sugar transport system (sugar- binding protein).
 
     0.827
Xcel_2219
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.823
Xcel_1139
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease).
 
     0.803
Xcel_0168
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: ccs:CCNA_00083 phosphoglucomutase/phosphomannomutase.
   
  
 0.724
Xcel_1140
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter, permease protein.
 
     0.684
Xcel_1881
1 4-alpha-glucan branching enzyme-like protein; KEGG: aba:Acid345_0241 malto-oligosyltrehalose trehalohydrolase.
  
  
 0.590
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.590
Xcel_2949
TIGRFAM: trehalose-phosphatase; PFAM: glycosyl transferase family 20; trehalose- phosphatase; KEGG: scl:sce0488 Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
  
  
 0.516
Xcel_1141
Hypothetical protein.
       0.461
Xcel_0747
KEGG: aba:Acid345_2329 alpha-1,6-glucosidases, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
   
 
 0.414
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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