STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1138PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3690 sugar transport system (sugar- binding protein). (423 aa)    
Predicted Functional Partners:
Xcel_1139
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3689 sugar transport system (permease).
 
  0.996
Xcel_1140
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter, permease protein.
 
 
 0.967
Xcel_1137
PFAM: Amylo-alpha-16-glucosidase; KEGG: bha:BH3691 hypothetical protein.
 
     0.827
Xcel_1047
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lch:Lcho_3327 binding-protein-dependent transport systems inner membrane component.
  
 
 0.668
Xcel_1141
Hypothetical protein.
       0.668
Xcel_1369
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_3397 binding-protein-dependent transport systems inner membrane component.
  
 
 0.668
Xcel_2795
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit.
  
 
 0.668
Xcel_2115
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_5336 binding-protein-dependent transport systems inner membrane component.
 
 
 0.605
Xcel_0918
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH2725 lactose transport system (permease).
 
 
 0.579
Xcel_1870
PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce1315 phosphotransferase.
  
     0.578
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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