STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1223PFAM: GCN5-related N-acetyltransferase; KEGG: mms:mma_0832 acetyltransferase. (176 aa)    
Predicted Functional Partners:
Xcel_2007
Response regulator receiver protein; KEGG: bph:Bphy_0469 two component transcriptional regulator.
  
     0.609
Xcel_1222
PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B5716 major facilitator transporter.
       0.568
Xcel_1993
Hypothetical protein; KEGG: acp:A2cp1_0462 exonuclease SbcC.
  
     0.543
Xcel_2146
Hypothetical protein.
  
     0.500
Xcel_2227
PFAM: metallophosphoesterase; KEGG: serine/threonine-protein kinase C.
  
     0.478
Xcel_2428
Hypothetical protein.
  
     0.460
Xcel_2446
Hypothetical protein.
  
     0.456
Xcel_0291
KEGG: mxa:MXAN_2497 hypothetical protein.
  
     0.402
Xcel_0154
PFAM: membrane-flanked domain; KEGG: eba:p1B146 hypothetical protein.
  
     0.400
Xcel_1103
Hypothetical protein; KEGG: GH10507 gene product from transcript GH10507- RA.
  
    0.400
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.