STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1236TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sat:SYN_02166 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (196 aa)    
Predicted Functional Partners:
Xcel_1237
PFAM: CinA domain protein; KEGG: dvm:DvMF_0903 CinA domain protein; Belongs to the CinA family.
 
  
 0.987
Xcel_1658
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ade:Adeh_2856 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.955
Xcel_1184
PFAM: phosphatidate cytidylyltransferase; KEGG: rce:RC1_1203 phosphatidate cytidylyltransferase; Belongs to the CDS family.
 
  
 0.951
Xcel_1734
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: gsu:GSU1825 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
0.930
Xcel_1238
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: lch:Lcho_0165 XRE family transcriptional regulator.
  
    0.853
Xcel_1235
KEGG: ank:AnaeK_2312 putative enzyme of poly-gamma- glutamate biosynthesis (capsule formation)-like protein.
       0.602
Xcel_1743
PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: mxa:MXAN_1362 phospholipase family protein.
 
   
 0.573
gpsA
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; KEGG: glo:Glov_0029 glycerol-3-phosphate dehydrogenase (NAD(P)(+)).
 
   
 0.567
Xcel_3359
TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SM_b20249 putative myo-inositol-1- phosphate synthase.
     
 0.437
Xcel_1735
PFAM: protein of unknown function DUF881; KEGG: bsu:BSU15250 hypothetical protein.
     
 0.432
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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