STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1315Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Xcel_1313
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: afw:Anae109_0073 2-alkenal reductase.
       0.799
Xcel_1314
Hypothetical protein; KEGG: dac:Daci_3838 serine/threonine protein kinase.
       0.799
Xcel_0989
KEGG: eta:ETA_23070 succinate dehydrogenase hydrophobic membrane anchor protein.
  
     0.775
Xcel_0990
TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: har:HEAR3329 putative succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit.
  
     0.775
Xcel_1883
PFAM: AFG1-family ATPase; KEGG: jan:Jann_0056 AFG1-like ATPase.
  
     0.775
Xcel_1220
Hypothetical protein.
  
     0.774
Xcel_1710
KEGG: scl:sce5035 hypothetical protein.
  
     0.770
Xcel_0987
KEGG: ftm:FTM_0139 succinate dehydrogenase iron- sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
     0.697
Xcel_0988
KEGG: sfu:Sfum_2104 succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase.
  
     0.587
Xcel_2212
Hypothetical protein.
  
     0.585
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.