STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1397Hypothetical protein. (63 aa)    
Predicted Functional Partners:
Xcel_1398
PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase.
       0.773
Xcel_1399
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: dal:Dalk_0613 penicillin-binding protein, 1A family.
       0.658
Xcel_1400
PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_4011 bifunctional deaminase- reductase domain protein.
       0.532
Xcel_1401
Putative PAS/PAC sensor protein; PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: met:M446_3030 multi-sensor hybrid histidine kinase.
       0.532
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.