STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1399PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: dal:Dalk_0613 penicillin-binding protein, 1A family. (807 aa)    
Predicted Functional Partners:
Xcel_1278
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: amc:MADE_03264 peptidoglycan synthetase FtsI.
 
 
 
 0.790
Xcel_1283
TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: gur:Gura_3975 cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.774
Xcel_1291
PFAM: DivIVA family protein; KEGG: bha:BH2546 cell-division initiation protein (septum placement).
   
 
 0.742
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.731
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
  
 0.678
Xcel_1037
PFAM: Peptidase M23; KEGG: bha:BH3600 cell wall-binding protein.
  
   
 0.671
Xcel_3275
PFAM: penicillin-binding protein transpeptidase; KEGG: mxa:MXAN_7139 putative penicillin-binding protein.
 
 
 
 0.668
Xcel_1397
Hypothetical protein.
       0.658
Xcel_1398
PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase.
       0.658
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.655
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
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