STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xcel_1400PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_4011 bifunctional deaminase- reductase domain protein. (209 aa)    
Predicted Functional Partners:
Xcel_1401
Putative PAS/PAC sensor protein; PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: met:M446_3030 multi-sensor hybrid histidine kinase.
       0.773
Xcel_1754
PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr0926 hypothetical protein.
  
     0.745
Xcel_1876
PFAM: bifunctional deaminase-reductase domain protein; KEGG: met:M446_6866 deaminase-reductase domain- containing protein.
 
     0.680
Xcel_1399
PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: dal:Dalk_0613 penicillin-binding protein, 1A family.
       0.620
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
  
  
 0.604
Xcel_1797
PFAM: bifunctional deaminase-reductase domain protein; KEGG: rec:RHECIAT_PC0000110 putative riboflavin biosynthesis protein.
  
     0.554
Xcel_1403
PFAM: ANTAR domain protein; KEGG: met:M446_0827 signal transduction histidine kinase.
 
     0.553
Xcel_1397
Hypothetical protein.
       0.532
Xcel_1398
PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase.
       0.532
Xcel_1402
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psa:PST_2128 oxidoreductase, short chain dehydrogenase/reductase family.
  
    0.528
Your Current Organism:
Xylanimonas cellulosilytica
NCBI taxonomy Id: 446471
Other names: X. cellulosilytica DSM 15894, Xylanimonas cellulosilytica DSM 15894, Xylanimonas cellulosilytica str. DSM 15894, Xylanimonas cellulosilytica strain DSM 15894
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.